PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010916182.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 1276aa    MW: 141086 Da    PI: 4.961
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010916182.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.92.4e-24752141128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tks 80 
                     lp+G++F+P+d +l+  +L++kv + +      +++  +i+++d      +++P++Lp  vk++ +  yfF+++ k y+t++ k+ +      ++
  XP_010916182.1  75 LPRGVKFDPSDGDLL-WHLRAKVGKGEadphplISE--FITSLDkddgFGYTHPQKLP-GVKKDGSVSYFFHRSFKIYNTKNPKHWTvhnddSED 165
                     699************.88****99998777655222..34443333348999******.677788899**********98775555423333568 PP

             NAM  81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      +W++ gk+++v++ +g++ g kk++v+y   ++ +k+ek++Wvmh+y+l
  XP_010916182.1 166 IFWQKVGKTRPVIV-DGSHQGGKKIMVLYasMKKGKKPEKSNWVMHQYHL 214
                     99************.9999**********7645677778*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.84E-2768232IPR003441NAC domain
PROSITE profilePS5100525.14275232IPR003441NAC domain
PfamPF023653.3E-1176214IPR003441NAC domain
PROSITE profilePS513797.248496527IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1276 aa     Download sequence    Send to blast
MDSAIAIDGS TDKVKIRAGD KCWMDDLDYM PLIKRRRLLL SSTSSPSVPV YSNRPPVDMA  60
VKRVSPGASQ EWPGLPRGVK FDPSDGDLLW HLRAKVGKGE ADPHPLISEF ITSLDKDDGF  120
GYTHPQKLPG VKKDGSVSYF FHRSFKIYNT KNPKHWTVHN DDSEDIFWQK VGKTRPVIVD  180
GSHQGGKKIM VLYASMKKGK KPEKSNWVMH QYHLGTGNGK ERELVVSKIF YENAQGLSPE  240
TVKAIVAEAE TLIVAKLTTG YHETKCNENR VGAGWRELDE YDNCSTEDSK QRKIKSQVLS  300
DVHQSAEGFL AGGKLHQEQS SCAAESWRTR SCISDDVQAN VKILKNNLKD ISMGDCDLVS  360
EGNKTSGLVV SIAMTSDLVR PCSLNAADSN SEHLPDASSL GDTQEYISSS NLIASSGFKG  420
HTVEQGGNDL LQLSNLPDHS TGIKVEHSDY MQTNPQKEGL EDTDMEVFIR ESEKEDLDHV  480
TLQERCNMLL SSTYSVSGDL NGSRWCQDCS ACTSKPCPNS VLHAQDGGFI SRSEKDGTLT  540
NHLGTENCGQ DILGLLQDIS SGPFIHPPSA QLPIGECCAD SVPESNDAKS MNNLMFDSPD  600
SATAGFDPYL QTSLNCQLSI LLQDSHSLEN HENNYISVYQ TSRPEVKPQV QSNKCVSDHS  660
QPLCSELSAQ QVQLKVEPLE EDFPKNISGI NAAVPHSADK NSPEEDCTAS TCTATPCTPD  720
ADMSCLRQTP VDQNDSNQVY NSILPTFPVE VKVEPLEESR INSVPEANAE NHLSLLLSNY  780
STEVFRAHTQ LSKDDHFQVN SSFNGNNSQE NMSTNYLCSD QNSVPENVIN SEAPKLQSSK  840
IPGFMSGTSL ENSCTVSQSS AKAGNHDNIS SSGDSLFEES GRNCSGQVSF LEKEHAGASN  900
ILSNSVQVKT EPLESDLLSM CENHLSSFPE SDTLGANVKR ETLDELSVDV IDPIKVGHAM  960
MPISGIVSNL DYGNNLNCSQ QAVPYYLIDG SINSINAKSS HFSLRRRRKK TATDSVETAL  1020
EEDAPGLLQV LLDKGITVEE IKLYGDVEDD EPLEVSSTDD SFEELETVMT KLFSERASLI  1080
KLSTARHIKG SKAVYCLACL ISLIEQTRYL HFRNSSVEWG WCRDLQSFIF VFKRHNRIVL  1140
ERPEYGYATY FFELVDSLPI PWQIKRLVTA MKLTSCSRTT LIENKPLLVG EDLTEGEACV  1200
LEEYGWTPNT GLGTMLNYCD RVVHDKKNER YSSEWRAKIG RLLMIGHDGG RTVLTNLPKK  1260
VAQFMENRNQ EIKLIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13337KRRRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010916182.10.0PREDICTED: uncharacterized protein LOC105041085 isoform X1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74793239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-56NAC family protein